As part of this aim we have developed some Docker images that can be used for basic bioinformatics analysis:
- rcaloger/demultiplexing.1, which provides bcl2fastq conversion.
- rcaloger/skewer1, which allows removal of adapters using skewer.
- rcaloger/rsem-bowtie2, which allows RNAseq reads counts using RSEM and BOWTIE2.
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