Sunday, November 20, 2016

Docker's images prepared by Bioinformatics and Genomics unit @ UNITO


The B&Gu is a interdisciplinary group developing tools to help Biologists to use of Next Generation Sequence Analysis tools.
As part of this aim we have developed some Docker images that can be used for basic bioinformatics analysis:
  • rcaloger/demultiplexing.1, which provides bcl2fastq conversion.
  • rcaloger/skewer1, which allows removal of  adapters using skewer.
  • rcaloger/rsem-bowtie2, which allows RNAseq reads counts using RSEM and BOWTIE2. 
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